{
  "_id": "6a101fb3acfb0bcc41c8b580",
  "Package": "aftsem",
  "Type": "Package",
  "Title": "Semiparametric Accelerated Failure Time Model",
  "Version": "1.0",
  "Date": "2024-09-01",
  "Maintainer": "Martin Benedikt <benedma2@cvut.cz>",
  "Description": "Implements several basic algorithms for estimating\nregression parameters for semiparametric accelerated failure\ntime (AFT) model. The main methods are: Jin rank-based method\n(Jin (2003) <doi:10.1093/biomet/90.2.341>), Heller’s estimating\nmethod (Heller (2012) <doi:10.1198/016214506000001257>),\nPolynomial smoothed Gehan function method (Chung (2013)\n<doi:10.1007/s11222-012-9333-9>), Buckley-James method (Buckley\n(1979) <doi:10.2307/2335161>) and Jin`s improved least squares\nmethod (Jin (2006) <doi:10.1093/biomet/93.1.147>). This package\ncan be used for modeling right-censored data and for comparing\ndifferent estimation algorithms.",
  "License": "GPL (>= 3)",
  "BugReports": "https://github.com/benedma2/aftsem-package/issues",
  "URL": "https://github.com/benedma2/aftsem-package",
  "Authors@R": "person(given = \"Martin\", family = \"Benedikt\",role = c(\"aut\", \"cre\"),email = \"benedma2@cvut.cz\")",
  "RoxygenNote": "7.3.1",
  "Encoding": "UTF-8",
  "Config/pak/sysreqs": "cmake",
  "Repository": "https://benedma2.r-universe.dev",
  "Date/Publication": "2024-09-17 14:00:30 UTC",
  "RemoteUrl": "https://github.com/benedma2/aftsem-package",
  "RemoteRef": "HEAD",
  "RemoteSha": "f03ae9bbbbff6ddc70333330b4bb5a3ebdaf7496",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-05-14 06:37:00 UTC",
    "User": "root"
  },
  "Author": "Martin Benedikt [aut, cre]",
  "MD5sum": "d2d54334c96e675dd2aa7a5248b2914a",
  "_user": "benedma2",
  "_type": "src",
  "_file": "aftsem_1.0.tar.gz",
  "_fileid": "962ee50258fa1a6aac30e01d99735c29594b15e7d767dd62953517d7d632b82a",
  "_filesize": 160588,
  "_sha256": "962ee50258fa1a6aac30e01d99735c29594b15e7d767dd62953517d7d632b82a",
  "_created": "2026-05-14T06:37:00.000Z",
  "_published": "2026-05-22T09:19:47.528Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77351421981,
      "time": 158,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "6988709986"
    },
    {
      "job": 77351421790,
      "time": 164,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "6988710954"
    },
    {
      "job": 77351422304,
      "time": 174,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6988713633"
    },
    {
      "job": 77351421982,
      "time": 155,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6988709370"
    },
    {
      "job": 77351422170,
      "time": 227,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "6988716304"
    },
    {
      "job": 77351421976,
      "time": 311,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "6988733105"
    },
    {
      "job": 77351421868,
      "time": 156,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6988705431"
    },
    {
      "job": 77351422052,
      "time": 379,
      "config": "macos-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6988750308"
    },
    {
      "job": 77351421770,
      "time": 233,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6988674718"
    },
    {
      "job": 77351420919,
      "time": 115,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7157103819"
    },
    {
      "job": 77351421800,
      "time": 153,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "6988708669"
    },
    {
      "job": 77351422537,
      "time": 188,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "6988717283"
    },
    {
      "job": 77351422352,
      "time": 151,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6988708210"
    }
  ],
  "_buildurl": "https://github.com/r-universe/benedma2/actions/runs/25845741538",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/benedma2/aftsem-package",
  "_commit": {
    "id": "f03ae9bbbbff6ddc70333330b4bb5a3ebdaf7496",
    "author": "martin.benedikt <ivan.dostal@dcos.cz>",
    "committer": "martin.benedikt <ivan.dostal@dcos.cz>",
    "message": "Changed README and DESCRIPTION file, also added a few comments in aftsem_fit.R file\n",
    "time": 1726581630
  },
  "_maintainer": {
    "name": "Martin Benedikt",
    "email": "benedma2@cvut.cz",
    "login": "benedma2",
    "uuid": 135640573
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.2.0",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "RcppArmadillo",
      "role": "LinkingTo"
    },
    {
      "package": "survival",
      "role": "Imports"
    },
    {
      "package": "Rcpp",
      "version": ">= 1.0.10",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "quantreg",
      "role": "Imports"
    },
    {
      "package": "optimx",
      "role": "Imports"
    }
  ],
  "_owner": "benedma2",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 2,
  "_contributors": [
    {
      "user": "benedma2",
      "count": 2,
      "uuid": 135640573
    }
  ],
  "_userbio": {
    "uuid": 135640573,
    "type": "user",
    "name": "benedma"
  },
  "_downloads": {
    "count": 218,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/aftsem"
  },
  "_devurl": "https://github.com/benedma2/aftsem-package",
  "_searchresults": 3,
  "_topics": [
    "openblas",
    "cpp",
    "openmp"
  ],
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/aftsem.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/benedma2/aftsem-package",
  "_realowner": "benedma2",
  "_cranurl": true,
  "_releases": [
    {
      "version": "1.0",
      "date": "2024-09-15"
    }
  ],
  "_exports": [
    "aftsem"
  ],
  "_help": [
    {
      "page": "aftsem-package",
      "title": "Semiparametric Accelerated Failure Time Model",
      "topics": [
        "aftsem-package"
      ]
    },
    {
      "page": "aftsem",
      "title": "Accelerated Failure Time Semiparametric Model",
      "topics": [
        "aftsem"
      ]
    },
    {
      "page": "aftsem_fit",
      "title": "Semi-parametric AFT Model Fitting",
      "topics": [
        "aftsem_fit"
      ]
    },
    {
      "page": "aftsem.control",
      "title": "Control list for package",
      "topics": [
        "aftsem.control"
      ]
    },
    {
      "page": "gehan_estimation",
      "title": "Gehan's Estimation for Survival Data",
      "topics": [
        "gehan_estimation"
      ]
    },
    {
      "page": "gehan_heller_estimation",
      "title": "Gehan-Heller Estimation of regression parameters",
      "topics": [
        "gehan_heller_estimation"
      ]
    },
    {
      "page": "gehan_poly_estimation",
      "title": "Estimation of Regression Parameters from Smoothed Gehan Function",
      "topics": [
        "gehan_poly_estimation"
      ]
    },
    {
      "page": "print.aftsem",
      "title": "Print method for aftsem xs",
      "topics": [
        "print.aftsem"
      ]
    },
    {
      "page": "print.summaryaftsem",
      "title": "Print method for objects of class `summaryaftsem`",
      "topics": [
        "print.summaryaftsem"
      ]
    },
    {
      "page": "summary.aftsem",
      "title": "Summary function for aftsem package",
      "topics": [
        "summary.aftsem"
      ]
    }
  ],
  "_readme": "https://github.com/benedma2/aftsem-package/raw/HEAD/README.md",
  "_rundeps": [
    "lattice",
    "MASS",
    "Matrix",
    "MatrixModels",
    "nloptr",
    "numDeriv",
    "optimx",
    "pracma",
    "quantreg",
    "Rcpp",
    "RcppArmadillo",
    "SparseM",
    "survival"
  ],
  "_sysdeps": [
    {
      "shlib": "liblapack",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.26+ds-1ubuntu0.1",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    },
    {
      "shlib": "libblas",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.26+ds-1ubuntu0.1",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    },
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "14.2.0-4ubuntu2~24.04.1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    },
    {
      "shlib": "libgomp",
      "package": "libgomp1",
      "source": "gcc",
      "version": "14.2.0-4ubuntu2~24.04.1",
      "name": "openmp",
      "homepage": "http://gcc.gnu.org/",
      "description": "GCC OpenMP (GOMP) support library"
    }
  ],
  "_score": 3,
  "_indexed": true,
  "_nocasepkg": "aftsem",
  "_universes": [
    "benedma2"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0",
      "date": "2026-05-14T06:39:35.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "f03ae9bbbbff6ddc70333330b4bb5a3ebdaf7496",
      "fileid": "9f4e794a5985b31775a5ff510c4bb36ff33d80da50a1cc3e6af3024a57c24831",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/benedma2/actions/runs/25845741538"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0",
      "date": "2026-05-14T06:39:32.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "f03ae9bbbbff6ddc70333330b4bb5a3ebdaf7496",
      "fileid": "61c8762a5105d5405a45de0a999107c4b10c0d31786dadf6e3e51d7c4e9af5a3",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/benedma2/actions/runs/25845741538"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0",
      "date": "2026-05-14T06:39:45.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "f03ae9bbbbff6ddc70333330b4bb5a3ebdaf7496",
      "fileid": "e5cb7963a533d13a2d776cb63611fe66f725bf09e74a3bec3a1f5e498195aae0",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/benedma2/actions/runs/25845741538"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0",
      "date": "2026-05-14T06:39:27.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "f03ae9bbbbff6ddc70333330b4bb5a3ebdaf7496",
      "fileid": "53e1798e75cc62cdef1ad06981e09b5558c96aff7db4da69a48400e18928ccd2",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/benedma2/actions/runs/25845741538"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0",
      "date": "2026-05-14T06:39:54.000Z",
      "arch": "aarch64",
      "commit": "f03ae9bbbbff6ddc70333330b4bb5a3ebdaf7496",
      "fileid": "1c4ab59862a31fec0791af95ae443c9381f9fb12e530d35f446923c4a4bda336",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/benedma2/actions/runs/25845741538"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0",
      "date": "2026-05-14T06:41:03.000Z",
      "arch": "x86_64",
      "commit": "f03ae9bbbbff6ddc70333330b4bb5a3ebdaf7496",
      "fileid": "24393a02d34e6190db68f7b431f8be2d9741897dd2f41bff64b4d170b9f5d200",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/benedma2/actions/runs/25845741538"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.0",
      "date": "2026-05-14T06:39:33.000Z",
      "arch": "aarch64",
      "commit": "f03ae9bbbbff6ddc70333330b4bb5a3ebdaf7496",
      "fileid": "5f54e70d4bad79cbee048b0075781e65da2eb53b7f0c48b1ae498c0f40137a77",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/benedma2/actions/runs/25845741538"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.0",
      "date": "2026-05-14T06:41:35.000Z",
      "arch": "x86_64",
      "commit": "f03ae9bbbbff6ddc70333330b4bb5a3ebdaf7496",
      "fileid": "1bab02ba6b5edab48b060c85ac34477ff58d83b82ac06756bacb680341b11753",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/benedma2/actions/runs/25845741538"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0",
      "date": "2026-05-14T06:38:47.000Z",
      "arch": "x86_64",
      "commit": "f03ae9bbbbff6ddc70333330b4bb5a3ebdaf7496",
      "fileid": "6b10be2c04694695e80826dd989c10d38d633d9417489a512fd3f17793f530e0",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/benedma2/actions/runs/25845741538"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.0",
      "date": "2026-05-14T06:39:03.000Z",
      "arch": "x86_64",
      "commit": "f03ae9bbbbff6ddc70333330b4bb5a3ebdaf7496",
      "fileid": "5d922686973fedb7954b50690e2d138be93e88e8a1a4fc5d831da80cfdf7c581",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/benedma2/actions/runs/25845741538"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.0",
      "date": "2026-05-14T06:38:44.000Z",
      "arch": "x86_64",
      "commit": "f03ae9bbbbff6ddc70333330b4bb5a3ebdaf7496",
      "fileid": "dfd7ebaf9c257ae49bdd462e2b021378274e4095f73d213a9fca1bc141f70b30",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/benedma2/actions/runs/25845741538"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0",
      "date": "2026-05-22T09:19:06.000Z",
      "arch": "emscripten",
      "commit": "f03ae9bbbbff6ddc70333330b4bb5a3ebdaf7496",
      "fileid": "1fe3fb52858e3d13c0bd90483e5919ed68f1e6ff7a19eb30d57924e5d23e0f60",
      "status": "success",
      "buildurl": "https://github.com/r-universe/benedma2/actions/runs/25845741538"
    }
  ]
}